Fig. 1 · Structure

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Pacritinib (SB1518)

Cat. No. A12694 CAS 937272-79-2

JAK2/FLT3 inhibitor

Pacritinib, also known as SB1518, is an orally bioavailable inhibitor of Janus kinase 2 (JAK2) and the JAK2 mutant JAK2V617F with potential antineoplastic activity. Pacritinib competes with JAK2 for ATP binding, which may result in inhibition of JAK2 activation, inhibition of the JAK-STAT signaling pathway, and so caspase-dependent apoptosis.

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Publications for Pacritinib

2 publications citing this product

  1. Angelina T Regua, .et al. , Cancer Lett, 2024, Jun 7:597:217023 PMID: 38852701
  2. Daniel Doheny, .et al. , Oncogene, 2020, Oct;39(42):6589-6605 PMID: 32929154

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Biological Activity

Bioactivity / Mechanism

Pacritinib inhibits recombinant JAK2 and FLT3 and also targets IRAK1 and CSF1R. Its kinase profile is assay dependent; biochemical inhibition alone does not establish cellular target dependence. [1]

Literature-reported observations and conditions; not Adooq-tested protocols or general treatment recommendations.

Target & Activity

Target Activity Value
JAK2V617F IC50 19 nM
JAK2wt IC50 23 nM
Tyk2 IC50 50 nM
JAK3 IC50 520 nM
JAK1 IC50 1280 nM
FLT3D835Y IC50 6 nM
FLT3wt IC50 22 nM

7 targets · Scroll to view more

Cellular Effect

Cell Line Activity Value Description Reference
BaF3 GI50 < 434 nM Growth inhibition of mouse BaF3 cells transfected in FLT3-TDK mutant measured after 72 hrs by CCK8 assay [PMID: 35923716]
BaF3 GI50 0.16 μM Antiproliferative activity against mouse BA/F3 cells harboring JAK2 V617F mutation assessed as cell viability after 48 hrs by Cell titer Glo assay [PMID: 21604762]
BaF3 IC50 1061.3 nM Inhibition of JAK2 V617F mutant in BAF3 cells assessed as reduction in cell growth measured after 72 hrs by MTT assay [PMID: 31670517]
BaF3 GI50 133 nM Growth inhibition of mouse BaF3 cells transfected in FLT3-ITD mutant measured after 72 hrs by CCK8 assay [PMID: 35923716]
BaF3 IC50 133 nM Cytotoxicity against mouse BaF3 cells expressing FLT3-ITD measured after 72 hrs by cell titre glo assay [PMID: 33719439]
BaF3 IC50 291 nM Cytotoxicity against mouse BaF3 cells expressing FLT3-ITD-F691L measured after 72 hrs by cell titre glo assay [PMID: 33719439]
BaF3 IC50 306 nM Cytotoxicity against mouse BaF3 cells expressing FLT3-ITD-D835H measured after 72 hrs by cell titre glo assay [PMID: 33719439]
BaF3 IC50 434 nM Cytotoxicity against mouse BaF3 cells expressing FLT3-ITD-D835Y measured after 72 hrs by cell titre glo assay [PMID: 33719439]
HCT-116 IC50 0.88 μM Antiproliferative activity against human HCT116 cells after 72 hrs by MTT assay [PMID: 27541357]
HCT-116 IC50 1.69 μM Antiproliferative activity against human HCT116 cells after 48 hrs by CellTiter-Glo assay [PMID: 27541357]
HEL GI50 1.1 μM Antiproliferative activity against human HEL cells assessed as growth inhibition after 72 hrs by CCK-8 assay [PMID: 31408808]
HEL 92.1.7 IC50 1.17 μM Antiproliferative activity against human HEL 92.1.7 cells after 36 hrs by PrestoBlue dye based assay [PMID: 28953386]
HEL 92.1.7 IC50 1.17 μM Antiproliferative activity against HEL 92.1.7 cells harboring JAK2 V617F mutant after 36 hrs by PrestoBlue dye based assay [PMID: 27541357]
HEL 92.1.7 IC50 1.726 μM Antiproliferative activity against HEL 92.1.7 cells harboring JAK2 V617F mutant after 48 hrs by CellTiter-Glo assay [PMID: 27541357]
HL-60 IC50 0.52 μM Antiproliferative activity against human HL60 cells after 48 hrs by CellTiter-Glo assay [PMID: 27541357]
HL-60 GI50 1.4 μM Antiproliferative activity against human HL60 cells assessed as growth inhibition after 72 hrs by CCK-8 assay [PMID: 31408808]
Jurkat IC50 0.839 μM Antiproliferative activity against human Jurkat cells after 48 hrs by CellTiter-Glo assay [PMID: 27541357]
KG-1 IC50 1.48 μM Antiproliferative activity against human KG1 cells after 48 hrs by CellTiter-Glo assay [PMID: 27541357]
KG-1 IC50 1.48 μM Antiproliferative activity against human KG1 cells after 48 hrs by CellTiter-Glo luminescent assay [PMID: 28953386]
KMS-12-BM IC50 0.75 μM Antiproliferative activity against human KMS-12-BM cells after 48 hrs by CellTiter-Glo assay [PMID: 27541357]

20 records · Scroll to view more

In Vitro Studies

In JAK2(V617F)-expressing SET-2 and HEL92.1.7 cells, pacritinib reduced STAT3/STAT5 phosphorylation despite increasing JAK2 Y1007/8 phosphorylation. In HEL92.1.7 cells, JAK2 Y221 phosphorylation decreased, demonstrating that phosphosite choice affects interpretation. [2]

Pacritinib inhibited FLT3 and downstream signaling in MV4-11 AML cells. A pan-JAK inhibitor did not reduce FLT3 phosphorylation at the tested concentrations, consistent with FLT3 pathway inhibition beyond JAK blockade. [3]

Recombinant kinase inhibition profile

Biochemical assay · 439-member recombinant kinase panel [1]

The assay measured multiple kinase targets and relatively little JAK1 inhibition at the screening concentration. Enzyme results do not establish cellular target dependence.

Measured endpoints — not treatment concentrations
EndpointReported resultReference
JAK2 catalytic activityIC50 6.0 nM[1]
JAK2(V617F) catalytic activityIC50 9.4 nM[1]
FLT3 catalytic activityIC50 14.8 nM[1]
JAK3 catalytic activityIC50 18.3 nM[1]
IRAK1 catalytic activityIC50 13.6 nM[1]
CSF1R catalytic activityIC50 39.5 nM[1]
JAK1 catalytic activityActivity remaining 82% control at 100 nM; IC50 indeterminate[1]

Literature-Reported Treatment Conditions

Treatment concentration
100 nM screen; 1–100 nM titration for kinases inhibited >50%
Exposure duration
120 min reaction at 25°C
Method
HotSpot radiometric filter-binding assay; 10 μM ATP
Vehicle
1% DMSO
Reported limits
No salt/counterion or per-kinase uncertainty reported in the selected table.
Methods and source locations

Compound reported in the paper: Pacritinib (SB1518)

Compound-level research evidence; no validation of an Adooq lot or salt-equivalent conversion.

Methods: Materials and kinase assay methods; Results, Table 1

JAK2 catalytic activity: Radiometric assay; background inactive-enzyme control; activity normalized to DMSO reactions. — Table 1; Methods: kinase assay methods

JAK2(V617F) catalytic activity: Radiometric assay; background inactive-enzyme control; activity normalized to DMSO reactions. — Table 1; Methods: kinase assay methods

FLT3 catalytic activity: Radiometric assay; background inactive-enzyme control; activity normalized to DMSO reactions. — Table 1; Methods: kinase assay methods

JAK3 catalytic activity: Radiometric assay; background inactive-enzyme control; activity normalized to DMSO reactions. — Table 1; Methods: kinase assay methods

IRAK1 catalytic activity: Radiometric assay; background inactive-enzyme control; activity normalized to DMSO reactions. — Table 1; Methods: kinase assay methods

CSF1R catalytic activity: Radiometric assay; background inactive-enzyme control; activity normalized to DMSO reactions. — Table 1; Methods: kinase assay methods

JAK1 catalytic activity: 100 nM screening assay normalized to vehicle. — Results first paragraph; Table 1

Phosphosite-dependent JAK2 signaling response

Cell-based study · SET-2 and HEL92.1.7 cells expressing endogenous JAK2(V617F) [2]

Pacritinib reduced downstream pSTAT3/pSTAT5 despite increased JAK2 Y1007/8 phosphorylation. In HEL92.1.7 cells, the Y221 site showed the opposite response to Y1007/8.

Measured endpoints — not treatment concentrations
EndpointReported resultReference
STAT3 Y705 and STAT5 Y694 phosphorylationQualitative concentration response Decreased with increasing SB1518[2]
HEL92.1.7 JAK2 phosphorylationQualitative site comparison Y1007/8 increased; Y221 decreased at 1 μM for 3 h[2]

Literature-Reported Treatment Conditions

Treatment concentration
0, 8, 40, 200, 1000 nM; site comparison at 1 μM
Exposure duration
3 h
Method
Immunoblotting for phosphoproteins, total JAK2 and actin
Reported limits
Cell-treatment vehicle concentration and biological replicate count not specified for Figure 2a,b,e.
Methods and source locations

Compound reported in the paper: Pacritinib (SB1518)

Compound-level research evidence; no validation of an Adooq lot or salt-equivalent conversion.

Results: Modulation of JAK2 signaling; Figure 2a,b,e; Compounds and reagents; Western blot analysis

STAT3 Y705 and STAT5 Y694 phosphorylation: Figure 2a,b immunoblots; total JAK2/actin controls. No densitometric IC50 inferred. — Figure 2a,b and adjacent Results

HEL92.1.7 JAK2 phosphorylation: Figure 2e immunoblot compared with untreated lane; total JAK2 control. — Figure 2e caption and adjacent Results

FLT3 pathway inhibition in MV4-11 cells

Cell-based study · FLT3-ITD MV4-11 human AML cells [3]

Pacritinib reduced FLT3 and downstream phosphorylation. The pan-JAK inhibitor comparator did not reduce FLT3 phosphorylation through 1000 nM; sunitinib provided a FLT3-active comparator.

Measured endpoints — not treatment concentrations
EndpointReported resultReference
FLT3 Y591 phosphorylationCellular IC50 80 nM[3]
STAT5 Y694 phosphorylationCellular IC50 40 nM[3]
ERK1/2 phosphorylationCellular IC50 33 nM[3]
Akt T308 phosphorylationCellular IC50 29 nM[3]
FLT3 phosphorylation with pan-JAK inhibitor JAKi-1Comparator response No reduction through 1000 nM[3]

Literature-Reported Treatment Conditions

Treatment concentration
0, 8, 40, 200, 1000 nM
Exposure duration
3 h
Method
Immunoblotting; β-actin loading control
Vehicle
0.1% DMSO
Reported limits
Number of independent immunoblot experiments and uncertainty of fitted cellular IC50 values not provided at this location.
Methods and source locations

Compound reported in the paper: Pacritinib (SB1518)

Compound-level research evidence; no validation of an Adooq lot or salt-equivalent conversion.

Results: Pacritinib modulates FLT3 signaling pathways; Figure 1a; Compounds and reagents; Western blot analyses

FLT3 Y591 phosphorylation: Author-reported quantified phosphorylation endpoint, not a treatment dose or cell-viability IC50. — Results: Pacritinib modulates FLT3 signaling pathways, first MV4-11 paragraph; Figure 1a

STAT5 Y694 phosphorylation: Author-reported quantified phosphorylation endpoint, not a treatment dose or cell-viability IC50. — Results: Pacritinib modulates FLT3 signaling pathways, first MV4-11 paragraph; Figure 1a

ERK1/2 phosphorylation: Author-reported quantified phosphorylation endpoint, not a treatment dose or cell-viability IC50. — Results: Pacritinib modulates FLT3 signaling pathways, first MV4-11 paragraph; Figure 1a

Akt T308 phosphorylation: Author-reported quantified phosphorylation endpoint, not a treatment dose or cell-viability IC50. — Results: Pacritinib modulates FLT3 signaling pathways, first MV4-11 paragraph; Figure 1a

FLT3 phosphorylation with pan-JAK inhibitor JAKi-1: 3 h treatment; immunoblot with β-actin loading control. — Figure 1a and adjacent Results

In Vivo Studies

In an orthotopic trastuzumab-refractory breast cancer xenograft model, pacritinib plus entrectinib reduced tumor growth and terminal tumor mass. Pacritinib alone did not significantly improve either endpoint versus vehicle. These findings concern the tested combination and model. [4]

Entrectinib–pacritinib in an orthotopic breast tumor model

Animal study · Female athymic nude mice bearing orthotopic luciferase-expressing BT474-TtzmR trastuzumab-refractory HER2-positive breast cancer xenografts [4]

The combination reduced tumor growth and terminal tumor mass; neither monotherapy significantly altered these endpoints versus vehicle. Body weight and ALT measurements provide limited tolerability observations.

Measured endpoints — not treatment concentrations
EndpointReported resultReference
Tumor growth and terminal tumor massBetween-group comparison Combination lower than vehicle and either monotherapy; single agents not significantly different from vehicle[4]
Body weight and ALT activityLimited tolerability observations No significant body-weight difference or ALT increase across treatment groups[4]

Conditions shared by the study groups

Route
Oral
Frequency
Twice daily, 5 days/week
Treatment course
From day 9 to study termination; Figure 4 shows follow-up through day 35
Vehicle
100% PEG
Study groups and reported outcomes
Group / doseComparatorObserved resultReference
Vehicle—Comparator for tumor growth and tumor mass.[4]
Pacritinib
50 mg/kg
VehicleNo significant tumor-growth or terminal tumor-mass reduction versus vehicle.[4]
Entrectinib
25 mg/kg
VehicleNo significant tumor-growth or terminal tumor-mass reduction versus vehicle.[4]
Entrectinib plus pacritinib
Entrectinib 25 mg/kg + pacritinib 50 mg/kg
Vehicle and both monotherapiesSignificantly reduced tumor growth and terminal tumor mass versus vehicle and either monotherapy.[4]
Vehicle
Model: Female athymic nude mice bearing orthotopic luciferase-expressing BT474-TtzmR trastuzumab-refractory HER2-positive breast cancer xenografts
Reported limits: N = 10–11 mice/group as caption; exact group-specific initial n not assigned.
Pacritinib
Model: Female athymic nude mice bearing orthotopic luciferase-expressing BT474-TtzmR trastuzumab-refractory HER2-positive breast cancer xenografts
Reported limits: N = 10–11 mice/group as caption; exact group-specific initial n not assigned.
Entrectinib
Model: Female athymic nude mice bearing orthotopic luciferase-expressing BT474-TtzmR trastuzumab-refractory HER2-positive breast cancer xenografts
Reported limits: N = 10–11 mice/group as caption; exact group-specific initial n not assigned.
Entrectinib plus pacritinib
Model: Female athymic nude mice bearing orthotopic luciferase-expressing BT474-TtzmR trastuzumab-refractory HER2-positive breast cancer xenografts
Reported limits: N = 10–11 mice/group as caption; exact group-specific initial n not assigned.
Methods and source locations

Compound reported in the paper: Pacritinib (SB1518)

Compound-level research evidence; no validation of an Adooq lot or salt-equivalent conversion.

Methods 2.2; Results 3.4; Figure 4A–C,L–M caption and image

Tumor growth and terminal tumor mass: Caliper measurements twice weekly and ex vivo tumor mass; caption reports N = 10–11/group, mean ± SEM, one-way ANOVA with Tukey post hoc test. — Results 3.4; Figure 4A–C and caption

Body weight and ALT activity: Body weights tracked through day 35 and ALT activity assay; no general safety conclusion inferred. — Results 3.4; Figure 4L–M

Vehicle · Methods 2.2; Results 3.4; Figure 4A–C

Pacritinib · Methods 2.2; Results 3.4; Figure 4A–C

Entrectinib · Methods 2.2; Results 3.4; Figure 4A–C

Entrectinib plus pacritinib · Methods 2.2; Results 3.4; Figure 4A–C

Specifications

Manufacturer Adooq Bioscience
Actions Inhibitor
CAS Number 937272-79-2
Applications JAK2/FLT3 inhibitor
Formula C28H32N4O3
Molecular Weight 472.58
Synonyms SB-1518
SMILES
C1CCN(C1)CCOC2=C3COC/C=C/COCC4=CC=CC(=C4)C5=NC(=NC=C5)NC(=C3)C=C2

Storage & Solubility

In Vitro Solubility

Reported Solubility

SolventReported Solubility
DMSO Warmed: 10 mg/mL (21.15 mM)
Water Insoluble
Ethanol Insoluble

Preparing Stock Solutions

Stock preparation is unavailable for this product molecular weight.

Calculated stock concentrations do not establish solvent solubility. Refer to the reported solubility data for experimental guidance.

Storage

Store powder at -20°C, keep desiccated.
In powder form, the chemical is stable for 36 months.
In solution, store at -20°C and use within 1 month to prevent loss of potency. Aliquot to avoid multiple freeze/thaw cycles.

Research References

  1. [1] Jack W Singer, Suliman Al-Fayoumi, Haiching Ma, et al. Comprehensive kinase profile of pacritinib, a nonmyelosuppressive Janus kinase 2 inhibitor Journal of Experimental Pharmacology (2016). PMID: 27574472 DOI: 10.2147/JEP.S110702 Source material
  2. [2] Hart, S, Goh, K C, Novotny-Diermayr, V, et al. SB1518, a novel macrocyclic pyrimidine-based JAK2 inhibitor for the treatment of myeloid and lymphoid malignancies Leukemia (2011). PMID: 21691275 DOI: 10.1038/leu.2011.148 Source material
  3. [3] S Hart, K C Goh, V Novotny-Diermayr, et al. Pacritinib (SB1518), a JAK2/FLT3 inhibitor for the treatment of acute myeloid leukemia Blood Cancer Journal (2011). PMID: 22829080 DOI: 10.1038/bcj.2011.43 Source material
  4. [4] Angelina T Regua, Shivani Bindal, Mariana K Najjar, et al. Dual inhibition of the TrkA and JAK2 pathways using entrectinib and pacritinib suppresses the growth and metastasis of HER2-positive and triple-negative breast cancers Cancer letters (2024). PMID: 38852701 DOI: 10.1016/j.canlet.2024.217023 Source material

Publications

2 publications citing this product

  1. Angelina T Regua, .et al. , Cancer Lett, 2024, Jun 7:597:217023 PMID: 38852701
  2. Daniel Doheny, .et al. , Oncogene, 2020, Oct;39(42):6589-6605 PMID: 32929154

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