In Caco-2 cells, pretreatment with 6 μM DHTS for 60 minutes reduced migration during subsequent 48-hour stimulation with 100 μM ATP compared with ATP alone. This scratch-assay result applies to ATP-stimulated migration and does not establish a stand-alone antiproliferative potency. [3]
HuR-RNA binding inhibition and specificity controls
Biochemical assay · Recombinant human HuR and TNF AU-rich-element RNA probe; comparator RNA-binding proteins [1]
DHTS inhibited formation of the HuR-RNA complex and mainly prevented association rather than disrupting the preformed complex. The reported fitted Ki is assay-specific. HuD-RNA binding was also affected, limiting claims of exclusive HuR selectivity.
Literature-Reported Treatment Conditions
- Treatment concentration
- Assay-dependent titration; Figure 1A screening: 50 nM; Figure 2C comparator panel: 2.5 and 5 μM.
- Exposure duration
- Equilibrium assays and kinetic experiments; preformed-complex control used 30 min pre-incubation.
- Method
- AlphaScreen and RNA electrophoretic mobility shift assay (REMSA)
- Vehicle
- DMSO
- Co-treatment
- None
- Reported limits
- Exact equilibrium incubation duration and final DMSO percentage were not established from the selected main-text material; SI PDF acquired but not read.
Methods and source locations
Compound reported in the paper: Dihydrotanshinone I; Compound label in the paper: DHTS
Compound-level research evidence; tested material and model remain study-specific.
Results, first subsection; Figure 1B-G and Figure 2C; Methods, Compounds and primary antibodies, AlphaScreen and REMSA assays
Inhibition of HuR-TNF ARE RNA complex formation; Ki fitted using fixed RNA concentration 50 nM and Kd 2.5 nM: One-site competition fit; mean ± SD, n = 3 independent experiments per Figure 1 caption — Results, first subsection; Figure 1D annotation and caption; Methods, AlphaScreen and REMSA assays
RNA-binding protein comparator panel: REMSA at DHTS 2.5 and 5 μM, Figure 2C; representative binding patterns, n = 3 independent experiments per caption — Results, first subsection, final paragraph; Figure 2C image/caption
Transcript-dependent redistribution of HuR binding in HeLa cells
Cell-based study · Human HeLa cervical adenocarcinoma cells; endogenous HuR RNA immunoprecipitation and microarray [2]
DHTS did not uniformly remove transcripts from HuR. Among 2306 HuR-bound mRNAs, binding decreased for 79 and increased for 558. RT-qPCR validation included enriched, unchanged and depleted targets; total levels of the selected validation transcripts were generally unchanged.
Literature-Reported Treatment Conditions
- Treatment concentration
- 1 μM (original GEO GSE94360 overall design)
- Exposure duration
- 3 hours (GSE94360 overall design)
- Method
- Cell exposure followed by endogenous HuR immunoprecipitation and RNA analysis
- Vehicle
- DMSO
- Co-treatment
- None
- Reported limits
- Microarray performed in duplicate and validation in triplicate; biological versus technical replicate identity is not specified in the figure caption.
Methods and source locations
Compound reported in the paper: Dihydrotanshinone I; Compound label in the paper: DHTS
Compound-level research evidence; tested material and model remain study-specific.
Results SEC3-6; Figure 4F-H; Methods SEC2-6 and SEC2-7; GEO GSE94360 overall design
Number of HuR-bound mRNAs with altered binding after DHTS treatment: RIP-chip, n = 2 microarray experiments; RT-qPCR validation n = 3 as captioned — Results SEC3-6, opening paragraph; Figure 4F-H caption; Methods SEC2-6
Attenuation of ATP-stimulated Caco-2 migration
Cell-based study · Human Caco-2 colorectal cancer cells; scratch wound healing assay [3]
DHTS pretreatment reduced ATP-stimulated migration relative to ATP alone. The figure includes vehicle control, ATP alone and separate ATP-plus-PPADS and ATP-plus-marimastat comparator groups. This supports a pharmacological association in this model; direct HuR target engagement was not measured by the scratch assay.
Literature-Reported Treatment Conditions
- Treatment concentration
- DHTS 6 μM; ATP 100 μM
- Exposure duration
- DHTS pretreatment for 60 min before ATP stimulation for 48 hours
- Method
- Scratch wound healing assay; migration quantified using ImageJ
- Vehicle
- Vehicle control included; treatment vehicle identity not specified in the selected text.
- Co-treatment
- DHTS plus ATP; PPADS and marimastat were separate comparator treatments.
- Reported limits
- Mitomycin C pretreatment to suppress proliferation is described, but its dose is not specified in the selected Methods; no DHTS-alone arm is shown in Figure 8.
Methods and source locations
Compound reported in the paper: Dihydrotanshinone I; Compound label in the paper: DHTS
Compound-level research evidence; tested material and model remain study-specific.
Results Sec21; Figure 8 image and caption; Methods Sec3, Sec4, Sec10, Sec12
ATP-stimulated rate of migration compared with ATP alone: Scratch wound healing; mean ± SD, n = 3 as reported; ANOVA with Tukey-Kramer post-hoc test in shared Methods — Figure 8 image/caption; Results Sec21; Methods Sec10 and Sec12