After 48 hours, INCB018424 reduced viable cell number in Ba/F3-EpoR-JAK2V617F cells (IC50 126 nM in the main Results) and HEL cells (EC50 186 nM). HEL growth was incompletely inhibited, and BCR-ABL-expressing comparators showed no significant viability response. [1]
In AB555P breast-tumor explants, 500 nM ruxolitinib for two days reduced pSTAT3 staining and MYC/BCL3 mRNA. Ki67 and ELF3 decreases were nonsignificant (p=0.099 and p=0.098). Samples were pieces from one PDX tumor cultured on the same sponge. [2]
JAK-family biochemical inhibition
Biochemical assay · Recombinant human JAK1, JAK2, JAK3 and TYK2 kinase domains [1]
INCB018424 inhibited JAK1 and JAK2 more potently than JAK3 in the same biochemical assay. TYK2 inhibition was also observed.
Literature-Reported Treatment Conditions
- Treatment concentration
- Concentration-response assay; tested concentration series not specified in the reviewed assay description. IC50 values are endpoints, not treatment doses.
- Exposure duration
- 1 hour
- Method
- Homogeneous time-resolved fluorescence kinase assay
- Vehicle
- 2.0% DMSO
- Co-treatment
- None
- Reported limits
- Exact chemical salt, analytical stereochemistry, concentration series and identity of control condition beyond assay control were not specified in reviewed assay text.
Methods and source locations
Compound reported in the paper: INCB018424 (ruxolitinib); Compound label in the paper: INCB018424
Evidence for the named compound in this model; salt/form and lot equivalence to SKU A11041 were not analytically established.
Table 1, enzyme-assay rows; Methods: Biochemical assays
JAK1 kinase inhibition: Homogeneous time-resolved fluorescence peptide assay; ATP 1 mM; 1 hour; signal inhibition versus control. — Table 1, JAK1 row; Methods: Biochemical assays
JAK2 kinase inhibition: Homogeneous time-resolved fluorescence peptide assay; ATP 1 mM; 1 hour; signal inhibition versus control. — Table 1, JAK2 row; Methods: Biochemical assays
JAK3 kinase inhibition: Homogeneous time-resolved fluorescence peptide assay; ATP 1 mM; 1 hour; signal inhibition versus control. — Table 1, JAK3 row; Methods: Biochemical assays
TYK2 kinase inhibition: Homogeneous time-resolved fluorescence peptide assay; ATP 1 mM; 1 hour; signal inhibition versus control. — Table 1, TYK2 row; Methods: Biochemical assays
Viable-cell response with BCR-ABL comparators
Cell-based study · Ba/F3-EpoR-JAK2V617F and HEL cells; Ba/F3-BCR-ABL and TF-1-BCR-ABL comparators [1]
INCB018424 reduced viable cell number in JAK2V617F-bearing cells after 48 hours. HEL growth was incompletely inhibited; BCR-ABL comparators showed no significant viability effect.
Literature-Reported Treatment Conditions
- Treatment concentration
- Increasing concentrations of INCB018424; exact complete dose series not tabulated. Do not interpret IC50/EC50 as fixed treatment concentrations.
- Exposure duration
- 48 hours
- Method
- Cellular ATP determination (Cell-Titer Glo) or viable-cell counting; exact readout allocation by cell line not specified in shared methods.
- Vehicle
- 0.2% final DMSO
- Co-treatment
- None
- Reported limits
- Replicate number and error-bar definition for Figure 1D not specified in its caption. Salt and analytical stereochemistry not given.
Methods and source locations
Compound reported in the paper: INCB018424 (ruxolitinib); Compound label in the paper: INCB018424
Evidence for the named compound in this model; salt/form and lot equivalence to SKU A11041 were not analytically established.
Figure 1D and caption; Results: Selective inhibition of JAK2V617F signaling, proliferation, and survival in cells, viability paragraph; Methods: Cell proliferation assay
Ba/F3-EpoR-JAK2V617F viable cell number: 48-hour cellular ATP determination or viable-cell counting; normalized to DMSO vehicle; nonlinear regression. — Results: viability paragraph linked to Figure 1D; Methods: Cell proliferation assay
HEL viable cell number: 48-hour viability assay; same shared proliferation-assay methods. — Results: viability paragraph; Figure 1D
Response limits across cell lines: Figure 1D concentration-response comparison; no exact values inferred from curves. — Figure 1D image and caption; Results: viability paragraph
Ruxolitinib response in AB555P breast-tumor explants
Cell-based study · ER-positive/PR-negative AB555P patient-derived breast tumor explant pieces cultured ex vivo [2]
Two-day treatment reduced pSTAT3 staining and MYC/BCL3 expression. Ki67 and ELF3 were lower numerically but did not reach p < 0.05. Pieces came from one PDX tumor and were cultured on the same sponge.
Literature-Reported Treatment Conditions
- Treatment concentration
- 500 nM ruxolitinib
- Exposure duration
- 2 days
- Method
- AB555P tumor pieces on media-soaked sponges; treatment versus no ruxolitinib; IHC and RNAscope.
- Vehicle
- Control labeled vehicle in Figure 6; solvent identity not specified for AB555P in reviewed methods.
- Co-treatment
- None; no exogenous IL6 treatment in the AB555P protocol.
- Reported limits
- Solvent identity and analytical chemical form not specified for AB555P. Tumor pieces are within-tumor samples, not independent patient replicates. STG335 conditions were not imported.
Methods and source locations
Compound reported in the paper: INCB018424 (ruxolitinib); Compound label in the paper: Ruxolitinib
Evidence for the named compound in this model; salt/form and lot equivalence to SKU A11041 were not analytically established.
Figure 6B-D and caption; Methods: Ex vivo explant experiments; corresponding Results paragraph
pSTAT3 Y705-positive staining: IHC quantified by Halo image analysis. — Figure 6B,C image and caption
Ki67-positive staining: IHC quantified by Halo; nonsignificant at 0.05. — Figure 6B,C image and caption
MYC, ELF3 and BCL3 mRNA: RNAscope dots per cell; TBP housekeeping control. ELF3 nonsignificant at 0.05. — Figure 6D image and caption